Here is a list of all documented class members with links to the class documentation for each member:

- e -

• edgeNeighbours : AdProcessGrid
• editAsNew: : ULTemplateViewController
• editedObject : ULDatabaseBrowser
• electrostaticEnergy : AdNonbondedTerm
• elementAtRow:column: : AdDataMatrix
• elementAtRow:ofColumnWithHeader: : AdDataMatrix
• elementCategory : AdElementSelection
• elementConfiguration : <AdSystemDataSource>
• elementMasses : AdDynamics , AdInteractionSystem , AdSystem
• elementPairsNotInInteractionsOfCategory: : AdDataSource
• elementProperties : <AdSystemDataSource> , AdInteractionSystem , AdSystem
• elements : FFInteraction
• elementsPerInteraction : FFInteractionType
• elementTypes : AdDynamics , AdInteractionSystem , AdSystem
• elementWithName:children:attributes: : XMLNode
• emptyPool : AdWorkerThread
• endPanel : ULDatabaseBrowser , ULProgressPanel
• endProduction : AdConfigurationGenerator
• endWorker : AdWorkerThread
• energies : AdTrajectory
• energy : <AdForceFieldTerm>
• energyAndGradientOfConfiguration:usingParameters:energyBuffer:gradientBuffer: : AdMinimiser(GSLWrappers)
• energyCheckpointInterval : AdCheckpointManager
• energyData : <AdSimulationStorageReading> , AdMutableTrajectory
• energyOfConfiguration:usingParameters: : AdMinimiser(GSLWrappers)
• epsilonOne : AdGRFNonbondedTerm
• epsilonTwo : AdGRFNonbondedTerm
• errorForCommand: : <AdCoreCommand>
• evaluateElectrostaticEnergy : AdNonbondedTerm
• evaluateElectrostaticForces : AdAmberCGNonbondedTerm , AdCGNonbondedTerm , AdGRFNonbondedTerm , AdNonbondedTerm , AdPureNonbondedTerm , AdShiftedNonbondedTerm
• evaluateEnergies : AdForceField , AdForceFieldCollection
• evaluateEnergiesForInteraction:threshold:selectionString: : AdCharmmForceField
• evaluateEnergiesUsingInteractionsInvolvingElements: : AdAmberForceField , AdCharmmForceField , AdForceField
• evaluateEnergy : <AdForceFieldTerm>
• evaluateFiniteDifferenceForces : AdMolecularMechanicsForceField
• evaluateFiniteDifferenceForcesForTerm: : AdMolecularMechanicsForceField
• evaluateForces : AdForceFieldCollection , <AdForceFieldTerm> , AdForceField
• evaluateForcesDueToElements: : AdCharmmForceField , AdAmberCGForceField , AdAmberForceField , AdCGForceField , AdForceField , AdEnzymixForceField
• evaluateLennardJonesEnergy : AdNonbondedTerm
• evaluateLennardJonesForces : AdCGNonbondedTerm , AdGRFNonbondedTerm , AdNonbondedTerm , AdShiftedNonbondedTerm , AdPureNonbondedTerm , AdAmberCGNonbondedTerm
• execute: : ViewController
• execute:error: : <AdCommandInterface>
• execute:error:process: : <ULServerCommandInterface> , <AdServerCommandInterface>
• export: : ULExportController , ULResponder
• exportAs: : ULResponder
• exportCurrentPasteboardObjectAs: : ULExportController
• exportObject:toFile:format: : ULExportController
• exportPanel : ULExportPanel
• extendMatrixWithColumn: : AdMutableDataMatrix
• extendMatrixWithColumnValues: : AdMutableDataMatrix
• extendMatrixWithMatrix: : AdMutableDataMatrix
• extendMatrixWithRow: : AdMutableDataMatrix
• externalObjects : AdIOManager , AdTemplateProcessor
• externalObjectsForProcess: : <AdServerInterface>
• externalReferences : ULTemplate
• externalReferenceTypes : ULTemplate
• extractObjectMetadataToIndex: : ULDatabaseIndex